Dr Roy Chaudhuri

School of Biosciences

Lecturer in Bioinformatics

r.chaudhuri@sheffield.ac.uk
+44 114 222 2837

Full contact details

Dr Roy Chaudhuri
School of Biosciences
Firth Court
Western Bank
ºù«Ӱҵ
S10 2TN
Research interests

My research interests are primarily in the area of bacterial genomics.

Current research topics include:

  • Comparative genomics and phylogenetics of bacterial pathogens, particularly E. coli and Salmonella
  • Use of transposon insertion sequencing methods (TraDIS/TnSeq/HITS/InSeq) to identify essential bacterial genes and genes important for survival in particular environments such as during infection of a model system
  • Development of user-friendly software tools and online resources for exploring data from -omics technologies. Examples include coliBASE, Xbase and the recently-funded .
Publications

Show: Featured publications All publications

Journal articles

  • Grant AJ, Oshota O, Chaudhuri RR, Mayho M, Peters SE, Clare S, Maskell DJ & Mastroeni P (2016) . Infection and Immunity, 84(4), 989-997. RIS download Bibtex download
  • Weinert LA, Chaudhuri RR, Wang J, Peters SE, Corander J, Jombart T, Baig A, Howell KJ, Vehkala M, Välimäki N , Harris D et al (2015) . Nature Communications, 6(1). RIS download Bibtex download
  • Howell KJ, Weinert LA, Chaudhuri RR, Luan S-L, Peters SE, Corander J, Harris D, Angen Ø, Aragon V, Bensaid A , Williamson SM et al (2014) . BMC Genomics, 15(1), 1179-1179. RIS download Bibtex download
  • Luan S-L, Chaudhuri RR, Peters SE, Mayho M, Weinert LA, Crowther SA, Wang J, Langford PR, Rycroft A, Wren BW , Tucker AW et al (2013) . Vet Microbiol, 166(3-4), 558-566. RIS download Bibtex download
  • Howell KJ, Weinert LA, Luan S-L, Peters SE, Chaudhuri RR, Harris D, Angen O, Aragon V, Parkhill J, Langford PR , Rycroft AN et al (2013) . J Bacteriol, 195(18), 4264-4273. RIS download Bibtex download
  • Chaudhuri RR, Morgan E, Peters SE, Pleasance SJ, Hudson DL, Davies HM, Wang J, van Diemen PM, Buckley AM, Bowen AJ , Pullinger GD et al (2013) . PLoS Genet, 9(4), e1003456. RIS download Bibtex download
  • Chaudhuri RR & Henderson IR (2012) . Infect Genet Evol, 12(2), 214-226. RIS download Bibtex download
  • Chaudhuri RR, Yu L, Kanji A, Perkins TT, Gardner PP, Choudhary J, Maskell DJ & Grant AJ (2011) . Microbiology, 157(Pt 10), 2922-2932. RIS download Bibtex download
  • Eckert SE, Dziva F, Chaudhuri RR, Langridge GC, Turner DJ, Pickard DJ, Maskell DJ, Thomson NR & Stevens MP (2011) . Journal of Bacteriology, 193(7), 1771-1776. RIS download Bibtex download
  • Crossman LC, Chaudhuri RR, Beatson SA, Wells TJ, Desvaux M, Cunningham AF, Petty NK, Mahon V, Brinkley C, Hobman JL , Savarino SJ et al (2010) . J Bacteriol, 192(21), 5822-5831. RIS download Bibtex download
  • Chaudhuri RR, Sebaihia M, Hobman JL, Webber MA, Leyton DL, Goldberg MD, Cunningham AF, Scott-Tucker A, Ferguson PR, Thomas CM , Frankel G et al (2010) . PLoS One, 5(1), e8801. RIS download Bibtex download
  • Chaudhuri RR, Allen AG, Owen PJ, Shalom G, Stone K, Harrison M, Burgis TA, Lockyer M, Garcia-Lara J, Foster SJ , Pleasance SJ et al (2009) . BMC Genomics, 10, 291. RIS download Bibtex download
  • Chaudhuri RR, Peters SE, Pleasance SJ, Northen H, Willers C, Paterson GK, Cone DB, Allen AG, Owen PJ, Shalom G , Stekel DJ et al (2009) . PLoS Pathogens, 5(7). RIS download Bibtex download
  • Rasko DA, Rosovitz MJ, Myers GSA, Mongodin EF, Fricke WF, Gajer P, Crabtree J, Sebaihia M, Thomson NR, Chaudhuri R , Henderson IR et al (2008) . Journal of Bacteriology, 190(20), 6881-6893. RIS download Bibtex download
  • Chaudhuri RR & Pallen MJ (2006) . Nucleic Acids Res, 34(Database issue), D335-D337. RIS download Bibtex download
  • Riley M, Abe T, Arnaud MB, Berlyn MKB, Blattner FR, Chaudhuri RR, Glasner JD, Horiuchi T, Keseler IM, Kosuge T , Mori H et al (2006) . Nucleic Acids Research, 34(1), 1-9. RIS download Bibtex download

All publications

Journal articles

  • Buddle JE, Thompson LM, Williams AS, Wright RCT, Durham WM, Turner CE, Chaudhuri RR, Brockhurst MA & Fagan RP (2024) . PLOS Biology, 22(8). RIS download Bibtex download
  • Hall JN, Bah SY, Khalid H, Brailey A, Coleman S, Kirk T, Hussain N, Tovey M, Chaudhuri RR, Davies S , Tilley L et al (2024) . Microbial Genomics, 10(8). RIS download Bibtex download
  • Hassan MU, Chaudhuri RR & Williamson MP (2023) . Protein Science, 32(11). RIS download Bibtex download
  • Ormsby MJ, Vaz F, Kirk JA, Barwinska-Sendra A, Hallam JC, Lanzoni-Mangutchi P, Cole J, Chaudhuri RR, Salgado PS, Fagan RP & Douce GR (2023) . PLOS Pathogens, 19(6). RIS download Bibtex download
  • Bah S, Keeley A, Armitage E, Khalid H, Chaudhuri R, Senghore E, Manneh J, Tilley L, Marks M, Darboe S , Sesay A et al (2023) . mSphere, 8(1). RIS download Bibtex download
  • Qiu S, Bradley J, Zhang P, Chaudhuri R, Blaxter M, Butlin R & Scholes J (2022) . RIS download Bibtex download
  • Court EK, Chaudhuri RR, Kapoore RV, Villa RX, Pandhal J, Biggs CA & Stafford GP (2021) . Microbiology, 167(12). RIS download Bibtex download
  • Bossé JT, Li Y, Leanse LG, Zhou L, Chaudhuri RR, Peters SE, Wang J, Maglennon GA, Holden MTG, Maskell DJ , Tucker AW et al (2021) . Animal Diseases, 1(1). RIS download Bibtex download
  • Nlebedim VU, Chaudhuri RR & Walters K (2021) . Bioinformatics. RIS download Bibtex download
  • Gilroy R, Ravi A, Getino M, Pursley I, Horton DL, Alikhan NF, Baker D, Gharbi K, Hall N, Watson M , Adriaenssens EM et al (2021) . PeerJ, 9. RIS download Bibtex download
  • Janganan TK, Mullin N, Dafis-Sagarmendi A, Brunt J, Tzokov SB, Stringer S, Moir A, Chaudhuri RR, Fagan RP, Hobbs JK & Bullough PA (2020) . mSphere, 5(4). RIS download Bibtex download
  • Haldenby S, Bronowski C, Nelson C, Kenny J, Martinez-Rodriguez C, Chaudhuri R, Williams NJ, Forbes K, Strachan NJ, Pulman J , Winstanley IN et al (2020) . PLoS ONE, 15(1). RIS download Bibtex download
  • Bossé JT, Li Y, Fernandez Crespo R, Angen Ø, Holden MTG, Weinert LA, Maskell DJ, Tucker AW, Wren BW, Rycroft AN & Langford PR (2020) . Microbiology Resource Announcements, 9(1). RIS download Bibtex download
  • Weinert LA, Chaudhuri RR, Wang J, Peters SE, Corander J, Jombart T, Baig A, Howell KJ, Vehkala M, Välimäki N , Harris D et al (2019) . Nature Communications, 10(1). RIS download Bibtex download
  • Canals R, Chaudhuri RR, Steiner RE, Owen SV, Quinones-Olvera N, Gordon MA, Baym M, Ibba M & Hinton JCD (2019) . PLOS Pathogens, 15(9). RIS download Bibtex download
  • Gray K, Green LR, Chaudhuri RR & Shaw JG (2019) . Microbiology Resource Announcements, 8(30). RIS download Bibtex download
  • Pattrick CA, Webb JP, Green J, Chaudhuri RR, Collins MO & Kelly DJ (2019) . mSystems, 4(4). RIS download Bibtex download
  • de Lussy-Kubisa L, Chaudhuri R & Fagan R (2019) . Access Microbiology, 1(1A). RIS download Bibtex download
  • Canals R, Hammarlöf DL, Kröger C, Owen SV, Fong WY, Lacharme-Lora L, Zhu X, Wenner N, Carden SE, Honeycutt J , Monack DM et al (2019) . PLoS Biology, 17(1). RIS download Bibtex download
  • Vohra P, Chaudhuri RR, Mayho M, Vrettou C, Chintoan-Uta C, Thomson NR, Hope JC, Hopkins J & Stevens MP (2019) . BMC Genomics, 20. RIS download Bibtex download
  • Brockmeier SL, Loving CL, Nicholson TL, Wang J, Peters SE, Weinert L, Chaudhuri R, Seilly DJ, Langford PR, Rycroft A , Wren BW et al (2018) . Infection and Immunity, 86(3). RIS download Bibtex download
  • Howell KJ, Weinert LA, Peters SE, Wang J, Hernandez-Garcia J, Chaudhuri RR, Luan S-L, Angen Ø, Aragon V, Williamson SM , Langford PR et al (2017) . Journal of Clinical Microbiology, 55(9), 2617-2628. RIS download Bibtex download
  • Dunne KA, Chaudhuri RR, Rossiter AE, Beriotto I, Browning DF, Squire D, Cunningham AF, Cole JA, Loman N & Henderson IR (2017) . Microbial Genomics, 3. RIS download Bibtex download
  • Bossé JT, Li Y, Rogers J, Fernandez Crespo R, Li Y, Chaudhuri RR, Holden MTG, Maskell DJ, Tucker AW, Wren BW , Rycroft AN et al (2017) . Frontiers in Microbiology, 8. RIS download Bibtex download
  • Stafford GP, Chaudhuri RR, Haraszthy V, Friedrich V, Schäffer C, Ruscitto A, Honma K & Sharma A (2016) . Genome Announcements, 4(6). RIS download Bibtex download
  • Li Y, Bossé JT, Williamson SM, Maskell DJ, Tucker AW, Wren BW, Rycroft AN & Langford PR (2016) . Veterinary Record, 179, 276-276. RIS download Bibtex download
  • Bossé JT, Li Y, Crespo RF, Chaudhuri RR, Rogers J, Holden MTG, Maskell DJ, Tucker AW, Wren BW, Rycroft AN , Langford PR et al (2016) . Frontiers in Microbiology, 7:810. RIS download Bibtex download
  • Chen GE, Hitchcock A, Jackson PJ, Chaudhuri RR, Dickman MJ, Hunter CN & Canniffe DP (2016) . Journal of Bacteriology, 198(9), 1393-1400. RIS download Bibtex download
  • Wielgoss S, Didelot X, Chaudhuri RR, Liu X, Weedall GD, Velicer GJ & Vos M (2016) . The ISME Journal, 10, 2468-2477. RIS download Bibtex download
  • Grant AJ, Oshota O, Chaudhuri RR, Mayho M, Peters SE, Clare S, Maskell DJ & Mastroeni P (2016) . Infection and Immunity, 84(4), 989-997. RIS download Bibtex download
  • Bossé JT, Chaudhuri RR, Li Y, Leanse LG, Fernandez Crespo R, Coupland P, Holden MTG, Bazzolli DM, Maskell DJ, Tucker AW , Wren BW et al (2016) . Genome Announcements, 4(1), e01667-15-e01667-15. RIS download Bibtex download
  • García-Lara J, Weihs F, Ma X, Walker L, Chaudhuri RR, Kasturiarachchi J, Crossley H, Golestanian R & Foster SJ (2015) . Proceedings of the National Academy of Sciences, 112(51), 15725-15730. RIS download Bibtex download
  • Howell KJ, Peters SE, Wang J, Hernandez-Garcia J, Weinert LA, Luan S-L, Chaudhuri RR, Angen Ø, Aragon V, Williamson SM , Parkhill J et al (2015) . Journal of Clinical Microbiology, 53(12), 3812-3821. RIS download Bibtex download
  • Weinert LA, Chaudhuri RR, Wang J, Peters SE, Corander J, Jombart T, Baig A, Howell KJ, Vehkala M, Välimäki N , Harris D et al (2015) . Nature Communications, 6(1). RIS download Bibtex download
  • Bossé JT, Li Y, Atherton TG, Walker S, Williamson SM, Rogers J, Chaudhuri RR, Weinert LA, Holden MTG, Maskell DJ , Tucker AW et al (2015) . Veterinary Microbiology, 178(3-4), 279-282. RIS download Bibtex download
  • Weinert LA, Chaudhuri RR, Wang J, Peters SE, Corander J, Jombart T, Baig A, Howell KJ, Vehkala M, Välimäki N , Harris D et al (2015) . Nature Communications, 6(1). RIS download Bibtex download
  • Bossé JT, Li Y, Walker S, Atherton T, Fernandez Crespo R, Williamson SM, Rogers J, Chaudhuri RR, Weinert LA, Oshota O , Holden MTG et al (2015) . Journal of Antimicrobial Chemotherapy, 70(8), 2217-2222. RIS download Bibtex download
  • Smith G, Smith C, Kenny JG, Chaudhuri RR & Ritchie MG (2015) . Molecular Biology and Evolution, 32(4), 888-895. RIS download Bibtex download
  • Bossé JT, Li Y, Atherton TG, Walker S, Williamson SM, Rogers J, Chaudhuri RR, Weinert LA, Holden MTG, Maskell DJ , Tucker AW et al (2015) . Veterinary Microbiology, 179(3-4), 341-341. RIS download Bibtex download
  • Moura AE, Kenny JG, Chaudhuri RR, Hughes MA, Reisinger RR, de Bruyn PJN, Dahlheim ME, Hall N & Hoelzel AR (2015) . Heredity, 114(1), 48-55. RIS download Bibtex download
  • Howell KJ, Weinert LA, Chaudhuri RR, Luan S-L, Peters SE, Corander J, Harris D, Angen Ø, Aragon V, Bensaid A , Williamson SM et al (2014) . BMC Genomics, 15(1), 1179-1179. RIS download Bibtex download
  • Moura AE, Kenny JG, Chaudhuri R, Hughes MA, J. Welch A, Reisinger RR, de Bruyn PJN, Dahlheim ME, Hall N & Hoelzel AR (2014) . Molecular Ecology, 23(21), 5179-5192. RIS download Bibtex download
  • Bosse JT, Li Y, Angen O, Weinert LA, Chaudhuri RR, Holden MT, Williamson SM, Maskell DJ, Tucker AW, Wren BW , Rycroft AN et al (2014) . Journal of Clinical Microbiology, 52(7), 2380-2385. RIS download Bibtex download
  • Capeness MJ, Lambert C, Lovering AL, Till R, Uchida K, Chaudhuri R, Alderwick LJ, Lee DJ, Swarbreck D, Liddell S , Aizawa S-I et al (2013) . PLOS ONE, 8(11). RIS download Bibtex download
  • Luan S-L, Chaudhuri RR, Peters SE, Mayho M, Weinert LA, Crowther SA, Wang J, Langford PR, Rycroft A, Wren BW , Tucker AW et al (2013) . Vet Microbiol, 166(3-4), 558-566. RIS download Bibtex download
  • Howell KJ, Weinert LA, Luan S-L, Peters SE, Chaudhuri RR, Harris D, Angen O, Aragon V, Parkhill J, Langford PR , Rycroft AN et al (2013) . J Bacteriol, 195(18), 4264-4273. RIS download Bibtex download
  • Chaudhuri RR, Morgan E, Peters SE, Pleasance SJ, Hudson DL, Davies HM, Wang J, van Diemen PM, Buckley AM, Bowen AJ , Pullinger GD et al (2013) . PLoS Genet, 9(4), e1003456. RIS download Bibtex download
  • Dziva F, Hauser H, Connor TR, van Diemen PM, Prescott G, Langridge GC, Eckert S, Chaudhuri RR, Ewers C, Mellata M , Mukhopadhyay S et al (2013) . Infection and Immunity, 81(3), 838-849. RIS download Bibtex download
  • Maglennon GA, Cook BS, Deeney AS, Bossé JT, Peters SE, Langford PR, Maskell DJ, Tucker AW, Wren BW & Rycroft AN (2013) . Veterinary Research, 44(1), 124-124. RIS download Bibtex download
  • Maglennon GA, Cook BS, Matthews D, Deeney AS, Bossé JT, Langford PR, Maskell DJ, Tucker AW, Wren BW & Rycroft AN (2013) . Veterinary Research, 44(1), 63-63. RIS download Bibtex download
  • Chaudhuri RR & Henderson IR (2012) . Infect Genet Evol, 12(2), 214-226. RIS download Bibtex download
  • Chaudhuri RR, Yu L, Kanji A, Perkins TT, Gardner PP, Choudhary J, Maskell DJ & Grant AJ (2011) . Microbiology, 157(Pt 10), 2922-2932. RIS download Bibtex download
  • Clarke DJ, Chaudhuri RR, Martin HM, Campbell BJ, Rhodes JM, Constantinidou C, Pallen MJ, Loman NJ, Cunningham AF, Browning DF & Henderson IR (2011) . Journal of Bacteriology, 193(17), 4540-4540. RIS download Bibtex download
  • Eckert SE, Dziva F, Chaudhuri RR, Langridge GC, Turner DJ, Pickard DJ, Maskell DJ, Thomson NR & Stevens MP (2011) . Journal of Bacteriology, 193(7), 1771-1776. RIS download Bibtex download
  • Knowles TJ, Browning DF, Jeeves M, Maderbocus R, Rajesh S, Sridhar P, Manoli E, Emery D, Sommer U, Spencer A , Leyton DL et al (2011) . EMBO Rep, 12(2), 123-128. RIS download Bibtex download
  • Crossman LC, Chaudhuri RR, Beatson SA, Wells TJ, Desvaux M, Cunningham AF, Petty NK, Mahon V, Brinkley C, Hobman JL , Savarino SJ et al (2010) . J Bacteriol, 192(21), 5822-5831. RIS download Bibtex download
  • Chaudhuri RR, Sebaihia M, Hobman JL, Webber MA, Leyton DL, Goldberg MD, Cunningham AF, Scott-Tucker A, Ferguson PR, Thomas CM , Frankel G et al (2010) . PLoS One, 5(1), e8801. RIS download Bibtex download
  • Wang J, Chaudhuri RR & Ellar DJ (2010) . Plasmid, 63(1), 46-52. RIS download Bibtex download
  • Chaudhuri RR (2009) . Methods Mol Biol, 465, 419-431. RIS download Bibtex download
  • Chaudhuri RR, Allen AG, Owen PJ, Shalom G, Stone K, Harrison M, Burgis TA, Lockyer M, Garcia-Lara J, Foster SJ , Pleasance SJ et al (2009) . BMC Genomics, 10, 291. RIS download Bibtex download
  • Chaudhuri RR, Peters SE, Pleasance SJ, Northen H, Willers C, Paterson GK, Cone DB, Allen AG, Owen PJ, Shalom G , Stekel DJ et al (2009) . PLoS Pathogens, 5(7). RIS download Bibtex download
  • Rasko DA, Rosovitz MJ, Myers GSA, Mongodin EF, Fricke WF, Gajer P, Crabtree J, Sebaihia M, Thomson NR, Chaudhuri R , Henderson IR et al (2008) . Journal of Bacteriology, 190(20), 6881-6893. RIS download Bibtex download
  • Chaudhuri RR, Loman NJ, Snyder LAS, Bailey CM, Stekel DJ & Pallen MJ (2008) . Nucleic Acids Res, 36(Database issue), D543-D546. RIS download Bibtex download
  • Chaudhuri RR, Ren C-P, Desmond L, Vincent GA, Silman NJ, Brehm JK, Elmore MJ, Hudson MJ, Forsman M, Isherwood KE , Gurycová D et al (2007) . PLoS One, 2(4), e352. RIS download Bibtex download
  • Turner SM, Chaudhuri RR, Jiang Z-D, DuPont H, Gyles C, Penn CW, Pallen MJ & Henderson IR (2006) . J Clin Microbiol, 44(12), 4528-4536. RIS download Bibtex download
  • Nagy G, Danino V, Dobrindt U, Pallen M, Chaudhuri R, Emödy L, Hinton JC & Hacker J (2006) . Infection and Immunity, 74(10), 5914-5925. RIS download Bibtex download
  • Chaudhuri RR & Pallen MJ (2006) . Nucleic Acids Res, 34(Database issue), D335-D337. RIS download Bibtex download
  • Riley M, Abe T, Arnaud MB, Berlyn MKB, Blattner FR, Chaudhuri RR, Glasner JD, Horiuchi T, Keseler IM, Kosuge T , Mori H et al (2006) . Nucleic Acids Research, 34(1), 1-9. RIS download Bibtex download
  • Ou HY, Chen LL, Lonnen J, Chaudhuri RR, Thani AB, Smith R, Garton NJ, Hinton J, Pallen M, Barer MR & Rajakumar K (2006) . Nucleic Acids Research, 34(1). RIS download Bibtex download
  • Ideses D, Gophna U, Paitan Y, Chaudhuri RR, Pallen MJ & Ron EZ (2005) . Journal of Bacteriology, 187(23), 8164-8171. RIS download Bibtex download
  • Desvaux M, Khan A, Scott-Tucker A, Chaudhuri RR, Pallen MJ & Henderson IR (2005) . Biochim Biophys Acta, 1745(2), 223-253. RIS download Bibtex download
  • Parham NJ, Pollard SJ, Chaudhuri RR, Beatson SA, Desvaux M, Russell MA, Ruiz J, Fivian A, Vila J & Henderson IR (2005) . J Clin Microbiol, 43(5), 2425-2434. RIS download Bibtex download
  • Pallen MJ, Penn CW & Chaudhuri RR (2005) . Trends Microbiol, 13(4), 143-149. RIS download Bibtex download
  • Ou HY, Smith R, Lucchini S, Hinton J, Chaudhuri RR, Pallen M, Barer MR & Rajakumar K (2005) . NUCLEIC ACIDS RESEARCH, 33(1). RIS download Bibtex download
  • Zhang L, Chaudhuri RR, Constantinidou C, Hobman JL, Patel MD, Jones AC, Sarti D, Roe AJ, Vlisidou I, Shaw RK , Falciani F et al (2004) . Infect Immun, 72(12), 7282-7293. RIS download Bibtex download
  • Betts HJ, Chaudhuri RR & Pallen MJ (2004) . Trends Microbiol, 12(11), 476-482. RIS download Bibtex download
  • Ren C-P, Chaudhuri RR, Fivian A, Bailey CM, Antonio M, Barnes WM & Pallen MJ (2004) . J Bacteriol, 186(11), 3547-3560. RIS download Bibtex download
  • Chaudhuri RR, Khan AM & Pallen MJ (2004) coliBASE: An online database for Escherichia coli, Shigella and Salmonella comparative genomics. Nucleic Acids Research, 32(DATABASE ISS.). RIS download Bibtex download
  • Chaudhuri RR, Khan AM & Pallen MJ (2004) . Nucleic Acids Res, 32(Database issue), D296-D299. RIS download Bibtex download
  • Pallen MJ, Chaudhuri RR & Henderson IR (2003) . Curr Opin Microbiol, 6(5), 519-527. RIS download Bibtex download
  • Pallen M, Chaudhuri R & Khan A (2002) . Trends Microbiol, 10(12), 556-563. RIS download Bibtex download
  • Sharp PM, Bailes E, Chaudhuri RR, Rodenburg CM, Santiago MO & Hahn BH (2001) . Philosophical Transactions of the Royal Society B: Biological Sciences, 356(1410), 867-876. RIS download Bibtex download
  • Qiu S, Bradley JM, Zhang P, Chaudhuri R, Blaxter M, Butlin RK & Scholes JD () . New Phytologist. RIS download Bibtex download
  • Oshota O, Conway M, Fookes M, Schreiber F, Chaudhuri RR, Yu L, Morgan FJE, Clare S, Choudhary J, Thomson NR , Lio P et al () . PLOS ONE, 12(8), e0181365-e0181365. RIS download Bibtex download
  • Wilson R, Bourne C, Chaudhuri RR, Gregory R, Kenny J & Cossins A () . PLoS ONE, 9(6), e100572-e100572. RIS download Bibtex download
  • Christiansen MT, Kaas RS, Chaudhuri RR, Holmes MA, Hasman H & Aarestrup FM () . PLoS ONE, 9(2), e89018-e89018. RIS download Bibtex download
  • Canals R, Chaudhuri RR, Steiner RE, Owen SV, Quinones-Olvera N, Gordon MA, Ibba M & Hinton JCD () . RIS download Bibtex download
  • Baig A, Weinert LA, Peters SE, Howell KJ, Chaudhuri RR, Wang J, Holden MTG, Parkhill J, Langford PR, Rycroft AN , Wren BW et al () . Frontiers in Microbiology, 6. RIS download Bibtex download
  • Nlebedim VU, Chaudhuri RR & Walters K () . Bioinformatics. RIS download Bibtex download

Chapters

  • Bailes E, Chaudhuri RR, Santiago ML, Bibollet-Ruche F, Hahn BH & Sharp PM (2002) , The Molecular Epidemiology of Human Viruses (pp. 65-96). Springer US RIS download Bibtex download
  • Chaudhuri RR & Thomas GH () , Bacterial Pathogenomics (pp. 21-48). ASM Press RIS download Bibtex download

Preprints

  • Hall JN, Bah SY, Khalid H, Brailey A, Coleman S, Kirk T, Hussain N, Tovey M, Chaudhuri RR, Davies S , Tilley L et al (2024) , Cold Spring Harbor Laboratory. RIS download Bibtex download
  • Buddle JE, Wright RCT, Turner CE, Chaudhuri RR, Brockhurst MA & Fagan RP (2023) . RIS download Bibtex download
  • Ormsby MJ, Vaz F, Kirk JA, Barwinska-Sendra A, Hallam JC, Lanzoni-Mangutchi P, Cole J, Chaudhuri RR, Salgado PS, Fagan RP & Douce GR (2022) , Cold Spring Harbor Laboratory. RIS download Bibtex download
  • Bah SY, Keeley AJ, Armitage EP, Khalid H, Chaudhuri RR, Senghore E, Manneh J, Tilley L, Marks M, Darboe S , Sesay AK et al (2021) , Cold Spring Harbor Laboratory. RIS download Bibtex download
  • Gilroy R, Ravi A, Getino M, Pursley I, Horton D, Alikhan N-F, Baker D, Gharbi K, Hall N, Watson M , Adriaenssens EM et al (2020) , Research Square Platform LLC. RIS download Bibtex download
  • Gilroy R, Ravi A, Getino M, Pursley I, Horton D, Alikhan N-F, Baker D, Gharbi K, Hall N, Watson M , Adriaenssens EM et al (2020) , Research Square Platform LLC. RIS download Bibtex download
  • Gilroy R, Ravi A, Getino M, Pursley I, Horton D, Alikhan N-F, Baker D, Gharbi K, Hall N, Watson M , Adriaenssens EM et al (2020) , Research Square Platform LLC. RIS download Bibtex download
  • Janganan TK, Mullin N, Dafis-Sagarmendi A, Brunt J, Tzokov SB, Stringer S, Moir A, Chaudhuri R, Fagan RP, Hobbs JK & Bullough PA (2020) , Cold Spring Harbor Laboratory. RIS download Bibtex download
  • Bossé JT, Li Y, Leanse LG, Zhou L, Chaudhuri RR, Peters SE, Wang J, Maglennon GA, Holden MTG, Maskell DJ , Tucker AW et al (2018) , Cold Spring Harbor Laboratory. RIS download Bibtex download
  • Canals R, Hammarlöf DL, Kröger C, Owen SV, Fong WY, Lacharme-Lora L, Zhu X, Wenner N, Carden SE, Honeycutt J , Monack DM et al () , Cold Spring Harbor Laboratory. RIS download Bibtex download
Teaching activities

Module Coordinator: MBB344 Genomic Science

Level 3 Modules

MBB339 Evolutionary Genetics
MBB344 Genomic Science
MBB360 Project
MBB363 Genetics Data Handling

Level 2 Modules

MBB267 Genes, Genomes and Chromosomes

Level 1 Modules

MBB165 Practical Molecular Bioscience 1